PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23620.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 119aa    MW: 13616.7 Da    PI: 5.758
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC68.51.1e-2125746101
       NF-YC  46 llskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101
                 l++k ce+ i eltlrsw ++eenkrr ++k d+a++++rt+ fdflvdiv +de+
  PHU23620.1   2 LMAKVCEMSIQELTLRSWFNTEENKRRMVQKKDVAKVIERTELFDFLVDIVHKDEI 57 
                 89***************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MLMAKVCEMS IQELTLRSWF NTEENKRRMV QKKDVAKVIE RTELFDFLVD IVHKDEIREE  60
GAGFGPSMLG STSSDVQNAH PPMGQTAPSE VMIRGTASSG KFELFWMLWV NLRVLYCTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.17e-30NF-YC family protein