PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23622.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YC
Protein Properties Length: 104aa    MW: 11668.9 Da    PI: 5.8925
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC60.63.4e-19278246101
       NF-YC  46 llskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101
                  +s a e+fi+elt+ sw hae++k rtl+k++i++a+  + if f+ divprde+
  PHU23622.1  27 QFSMAFEVFIMELTVPSWFHAEDKKHRTLQKNNISNAIRLSGIFHFICDIVPRDEI 82 
                 5999**************************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MENNSHQSRA NAAAAAQSDH LLEQQQQFSM AFEVFIMELT VPSWFHAEDK KHRTLQKNNI  60
SNAIRLSGIF HFICDIVPRD EINEEAMAHK TARGGSSGQD NTDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.15e-21NF-YC family protein