PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23636.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YC

Protein Properties

Length: 232aa MW: 25405.7 Da PI: 4.8558

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	179.5	3e-56	42	146	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv PHU23636.1 42 QLQMFWNYQrqeIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 140 89***998899********************************************************************************** PP NF-YC 97 prdelk 102 prde+k PHU23636.1 141 PRDEIK 146 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MENSPQQSAA NAAAAAAAAA AQSGGYPTQP PYHHLLQQQQ QQLQMFWNYQ RQEIEQVNDF 60 KNHQLPLARI KKIMKADEDV RMISAEAPIL FAKACELFIL ELTIRSWLHA EENKRRTLQK 120 NDIAAAITRT DIFDFLVDIV PRDEIKEECA GLGPPGMVGS TASGVPYYYP PMGQPAPPGV 180 MMGRPAMPGV DPSMYVQPPP PPSQAWQSVW QTAEDNSYAG GGSNGQGSLD GQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	121	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	1e-98	NF-YC family protein