PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23735.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 317aa MW: 36090.1 Da PI: 4.9959

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23735.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.9	7.2e-08	263	296	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ ++ LA+++gL+ +q+ +WF N+R ++ PHU23735.1 263 WPYPTEVDKVFLAESTGLDPKQINNWFINQRKRH 296 58*****************************885 PP
2	ELK	22.6	2.6e-08	216	237	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E+K+ L+ KYsgy+ sLk+ F+ PHU23735.1 216 EIKDKLMGKYSGYITSLKHNFC 237 89****************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MREMYEFGSS SSSSDGGGYY SDDHYNFQAM EYIEWPPAFR GGTVTLAVDS SPNLQEDQKN 60 IQAKISSHHL YPMLLLSHID CHKVGAPPEI VNMLDNIVQE NDLYRKSSSS SNTSLNQLMV 120 TDDSELDEFM ATYCDVLAKF KSDLTMCFNE SATFLNNVQS QLTNLCTTTN ISEKGAEAVA 180 EVEAEESDTN GGGEANNENE LKVSSTSDEM CRRRSEIKDK LMGKYSGYIT SLKHNFCKKN 240 NKGKLPREAT KILFNWWNTH YNWPYPTEVD KVFLAESTGL DPKQINNWFI NQRKRHWKPS 300 ENMQFAVMET IHGHFSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	9e-77	TALE family protein