PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23749.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 185aa    MW: 21673.1 Da    PI: 4.5596
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.33e-173979345
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      WT+eEd +l++a+++ G++ W+ Ia+++  gRt++++k++w+
       PHU23749.1 39 LWTEEEDRILIEAHAEIGNK-WAEIAKRLT-GRTENSIKNHWN 79
                     6*******************.********9.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MGEAPSYCSL KNYDSKNEDH YKQIVGCFDE DFHDMKKDLW TEEEDRILIE AHAEIGNKWA  60
EIAKRLTGRT ENSIKNHWNA TKRRQFTRRK CRTKWCSPSS ILQNYIKSLN FEKGNNNSAP  120
KIEPIDQQVP ADNYDFGEFD LEDKLFDDLE NVPNYCELAQ LIMQDAEVNK EVDLMDFISP  180
NPENV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.16e-37MYB family protein