PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23750.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 228aa    MW: 26013 Da    PI: 7.6342
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23750.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.28e-18176222148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      ++ WT eEd +l+++v+++G + W+ Ia+++  gR +kqc++rw+++l
       PHU23750.1 176 KDQWTIEEDRILINLVEKFGDRKWSEIAKMLK-GRIGKQCRERWNNHL 222
                      678****************************9.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MDFDPSSKQD VFCTIPTDYL HDFHHLDLTF SLAGGPLTFN TNPDHMIEMD SGYEHPLFDP  60
LSNHGDNFSS MGQDFNFGYE FKPFEQNGNA SGSTLFMKNF ESSTDMKSIN FNVVRDESSC  120
VTSTIENNGT NNVYNDKEIG GKKNKKLIKS NDIKSSSSSS MRKSGRGTRK KSKSAKDQWT  180
IEEDRILINL VEKFGDRKWS EIAKMLKGRI GKQCRERWNN HLRPDIKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.12e-23MYB family protein