PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23871.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 184aa    MW: 20784 Da    PI: 8.216
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH192.6e-061767654
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksL 54
                +  E++RR +++   ++L +ll ++ + +s+K  l+  + + +A+ YI +L
  PHU23871.1 17 KTLEKNRRIKMKLLCSKLFSLLSPPHHHQSTKevLTQQDQVDQAITYIEEL 67
                578*******************998777788779**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MGSSYVISTS AEKLDRKTLE KNRRIKMKLL CSKLFSLLSP PHHHQSTKEV LTQQDQVDQA  60
ITYIEELKEI VEVLKRRKEE LAQGTGDQSK KFMPTTAYTS IKTPMVEVRD LGSTLEVILT  120
CGLQKNFTVQ EVIKIIEEEG AQVVTADYST IGDTIYYTIH AQVKITRLGI DASSVHLRLQ  180
MLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-20bHLH family protein