PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23906.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family LBD
Protein Properties Length: 258aa    MW: 29986.1 Da    PI: 5.6977
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26036.31.6e-1117732682
      DUF260 26 qpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilk 82
                + ++++n++++FG ++  +++++++++ r+++++s +yeA+ r++dP++G +++ ++
  PHU23906.1 17 KDETYKNIEQVFGLAQFERFYDRVEPQWRDALIDSYAYEANERIKDPINGITKFCKH 73
                4689**********************************************9988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MWNKMQVSEP SPTTKLKDET YKNIEQVFGL AQFERFYDRV EPQWRDALID SYAYEANERI  60
KDPINGITKF CKHIVDPGVK SLTLDDDRMI TQYLLYGDIL NLSAADFENF DTVIISCCSE  120
IKRRKVNSRC RQLTDPIAFH SVQCRGSLAE IFVDLKSHTV YERLFGQDLK SIMHFCSFEK  180
AIAVPWQTLT EGVSEIFLPM RVDENFEATH RRNVGKLSAT DFQHLKSFKD VLCDKQLVKR  240
ETETLEFSGR ELRSLDSD