PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23911.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 246aa    MW: 27975.8 Da    PI: 5.2401
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.8e-053964123
                EEET..TTTEEESSHHHHHHHHHH.T CS
     zf-C2H2  1 ykCp..dCgksFsrksnLkrHirt.H 23
                + Cp   Cgk++ + + Lk+Hi++ H
  PHU23911.1 39 HICPylACGKRYAHEYKLKNHISStH 64
                6799999***************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MLAVLLIQDS DVCAIIYMAF SLDFNLRSHM KTHSQENYHI CPYLACGKRY AHEYKLKNHI  60
SSTHQKNTPV APKYTLPVEK PVKTPKSTPA TYGSSSSERP YSCPYEGCDK SYIHEYKPNL  120
LLRNMHPGHL PDDNAKNAQS AADNEMDEGS DQDTYAARRG NGRIQKQSRP KPSLKQPPLK  180
VARKGSSSAA CQANLSISKK PWLLKEENYN EEDSEETEEE RERDDVGEGW RYGENDDDDE  240
ETEEDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06634.32e-70C2H2 family protein