PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23996.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family LFY
Protein Properties Length: 422aa    MW: 46687.3 Da    PI: 6.3042
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY636.25.2e-19414021386
     FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseap..........leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddl 89 
                 mdpeafsaslfkwdpr a+ +pp+rll   a+++            + +  ++++r+l +leelf+ayG+ry+t+akiaelGftv+tL+dmkdeeldd+
  PHU23996.1   1 MDPEAFSASLFKWDPRGAM-PPPSRLLDPVAAPPLLppppplstapAYSIRSSTTRDLGGLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDDM 98 
                 9**************9887.566666655554442122234433223333333444455**************************************** PP

     FLO_LFY  90 mkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqe.ekeaagsggeglgeaelvaaeekkseeekkk 187
                 m+sls+ifr++llvGeryGikaa+rae rrleeee +++r ++ls+  +++ldalsqeglseepvq+ e+eaagsg  ++ +a++ +  +  +++++kk
  PHU23996.1  99 MNSLSQIFRWELLVGERYGIKAAIRAEWRRLEEEE-ARRRGHILSDGGTNVLDALSQEGLSEEPVQQhEREAAGSGTWEVVAASAGGGGR-LKQRRRKK 195
                 *********************************88.88888999999999***************9967779999888866666665554.44445555 PP

     FLO_LFY 188 askkkqkrkkkkelkseededeeeeededeeg........sgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcP 278
                 a+++ +  ++++ ++ eed+++ee  d+dee+        +g + +erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekcP
  PHU23996.1 196 AATAGATGRERRGMSGEEDDETEEFGDDDEENineaggcgGGGGTSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCP 294
                 5454444444445455555555555555544444555543556666***************************************************** PP

     FLO_LFY 279 tkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqL 377
                 tkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLde+asnalrrafkergenvGawrqacykplvaiaa+qgwdid++fnahprL+iWYvPtkLrqL
  PHU23996.1 295 TKVTNQVFRYAKKSGASYINKPKMRHYVHCYALHCLDEDASNALRRAFKERGENVGAWRQACYKPLVAIAAQQGWDIDSIFNAHPRLAIWYVPTKLRQL 393
                 *************************************************************************************************** PP

     FLO_LFY 378 Chlerskas 386
                 Ch ers+a+
  PHU23996.1 394 CHSERSNAA 402
                 ******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MDPEAFSASL FKWDPRGAMP PPSRLLDPVA APPLLPPPPP LSTAPAYSIR SSTTRDLGGL  60
EELFQAYGIR YYTAAKIAEL GFTVNTLLDM KDEELDDMMN SLSQIFRWEL LVGERYGIKA  120
AIRAEWRRLE EEEARRRGHI LSDGGTNVLD ALSQEGLSEE PVQQHEREAA GSGTWEVVAA  180
SAGGGGRLKQ RRRKKAATAG ATGRERRGMS GEEDDETEEF GDDDEENINE AGGCGGGGGT  240
SERQREHPFI VTEPGEVARG KKNGLDYLFH LYEQCREFLI QVQNIAKERG EKCPTKVTNQ  300
VFRYAKKSGA SYINKPKMRH YVHCYALHCL DEDASNALRR AFKERGENVG AWRQACYKPL  360
VAIAAQQGWD IDSIFNAHPR LAIWYVPTKL RQLCHSERSN AAAVGSSSVS GGGVVADHLP  420
HF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-108LFY family protein