PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU24066.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 332aa MW: 38120.1 Da PI: 7.5302

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU24066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.3	3.5e-54	20	146	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL kkv + ++++ +i evd++kvePw+Lp k+k +ekewyfF+ rdkky+tg r+nrat++gyWkatgkdke+++ +++l PHU24066.1 20 LPPGFRFHPTDEELITHYLSKKVVDINFSA-IAIGEVDMNKVEPWELPWKAKIGEKEWYFFCVRDKKYPTGLRTNRATAAGYWKATGKDKEIFR-GKSL 116 79***********************999.88***********98999**************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrap+gekt+Wv heyrle PHU24066.1 117 VGMKKTLVFYKGRAPRGEKTNWVTHEYRLE 146 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MMENFSGVVK EDDQQQQMEL PPGFRFHPTD EELITHYLSK KVVDINFSAI AIGEVDMNKV 60 EPWELPWKAK IGEKEWYFFC VRDKKYPTGL RTNRATAAGY WKATGKDKEI FRGKSLVGMK 120 KTLVFYKGRA PRGEKTNWVT HEYRLEGRLS LHNLAKTVKN DWVICRVFQK TTGGKKIHIS 180 GLMRGSCDEN EVDNSFLPPL TDSSPNHVHC FSNFLTAQQK NQDNNMINSF NTCPNFPVLS 240 NSIDIFPRNS LPNAFSWNQT VPLQHNFPQP GSFPLQDPAA LRNLLENYGQ NMQQSFKKET 300 DIISVSQETG ISTDMNTEIT STQQDLDCFW NY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-129	NAC family protein