PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24096.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 241aa    MW: 26343.9 Da    PI: 8.4809
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000196789123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C + F ++  L  H++ H
  PHU24096.1 67 FSCNYCQRKFYSSQALGGHQNAH 89
                89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MEVQASEQIS NNNQTTQDDQ ENDDLFLDLS LDHGPKSNII PTSSSDASRA ASNNNNNNNN  60
ESEPRIFSCN YCQRKFYSSQ ALGGHQNAHK RERTIAKRGQ KISSSAAFGY DKYSSMASLP  120
LHGSFNRSLG IQVHSMIHKP TISTTFGAPT LYGHPGWSIR RPIDQQPAVG RLGTESNNCH  180
VAGTSSGGGA ARFDNIIQKF PVVQVDGISP YRWDSGGGPP HITKSSNNQD ELKKLDLSLR  240
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.18e-42C2H2 family protein