PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24101.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 176aa    MW: 19708.9 Da    PI: 5.0433
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.9e-19752251
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                +y+GVr+++ +g+Wv+eIr+ps    ++r++lg++ tae+Aa+a+++a++
  PHU24101.1  7 KYRGVRQRH-WGSWVSEIRHPSL---KTRIWLGTYETAEDAARAYDEAAR 52
                8*******9.**********944...5*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MAPPQQKYRG VRQRHWGSWV SEIRHPSLKT RIWLGTYETA EDAARAYDEA ARLVCGPTAR  60
TNFPYNADDS QSFLSSALIA KLQRCQMTSF TTMPKRPGTT KLEDGKKENQ ISPLIRNRGD  120
GDQGQSTESA SQQFNALEDE HIDQMIEELL DYGSIEMSSV LQEQDIASNG NPSVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.14e-45ERF family protein