PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24391.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 354aa    MW: 39599.3 Da    PI: 9.8174
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.000352823181455
                 HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  PHU24391.1 282 EKLGDRITALHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 318
                 56678888888888887.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MLSTRPLSRG PRLLRGPHRT EIRVLFVVDD VSGGKVKFKD GTEDAMYAAV ISLIVPKAIK  60
GKPFQWRFSI WVDKPTPGNA LMNLRYKDER AVEVRGKGIV ALLLPLLNSS LVKNFLRPIS  120
KDKTSDSSVD DTLCRIYQRK PTIPFLAIPC LHRAGLSCDQ EKSDISQFQH QYKKLEDWEE  180
IQNLNSIHNN NNNNNNNTPC SSNFRVPVVD VVKPEMVGQL LYGYYQDLPA TSSPASSCVT  240
TNLGHSNIFN FSPPPNKITT TNKVVEPKHQ HHPDHSSEVR KEKLGDRITA LHQLVSPFGK  300
TDTASVLSEA IGYIRFLQAQ IQALSSPYMG NVAGSMGHTH QQSVRALLLL HIFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-25bHLH family protein