PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24433.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 276aa    MW: 30516 Da    PI: 7.1779
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.93.3e-1563112355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  PHU24433.1  63 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 112
                 9***************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
TEEKAARAYD LAALKYWGPN THINSPLSTY EKELEEMKTM NRQEFVAHLR RKSSGFSRGA  60
SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGTSAVTNFD  120
ISRYDVKRIC SSSTLIAGDL AKRSPSKDSV VFPSSYEDYN SCTTSPQPIL AITNGEQFQQ  180
PVDSFMDMMP PMMAAAGSSS RSSSSAPSPK CSGSGEMSCD FGVGLEYPQA YYSSVQVQDH  240
KFEDGRKGNN DDPPSSGRIG NMDLVHPVPM FALWNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.12e-82AP2 family protein