PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU24512.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 773aa MW: 88347.9 Da PI: 6.6597

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU24512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.5	7.2e-26	28	115	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fY+eYAk+ GF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vkk++ +gkw+++++ +eHnHel p PHU24512.1 28 EFYKEYAKSEGFGTAKLSSRRSRATKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKKRSsNGKWYIHSFIKEHNHELLP 115 6**************************************999877....9****************9**************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 773 aa Download sequence
MEPNVGLGNS NVEPRDDMEF DTHEAAYEFY KEYAKSEGFG TAKLSSRRSR ATKEFIDAKF 60 SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKKRSSNGKW YIHSFIKEHN HELLPAQVHF 120 FRSHRNVDPL NNDAKVRRKK MLAPVSKQYV AYQFSGNLEN LFRNQNDRGR SLSLEEGDAQ 180 ILLELFVHMQ EENPRFFYAV DLNEEHQLRN VFWVDAKGID SYSKFGDVVS FDTTYFTNKY 240 KIPLVLFIGA NHHVQPTLLG CALIADETVH TLIWLMRTWC LAMGGRGPRI LLSDQNDNVK 300 AAVGAVLPDT QLYFSLWSIL EKIPRCLDYL SMWHELFMAK FSKCIYKSWT EEQFEHRWWK 360 LIEKFNLRED EWVQSLYEDR KLWVPSFMRD VSFASLSMAS RTESLNSFFD KYIQSETSLR 420 DFIGQHKLIL EDWYEEEAKA NFDAWHEMPE LKTPSPFEKQ MLLIYTHEIF KKFQVEVLGA 480 AACHLKKESE DGTSITYSVK DFDANQDFMV EWDAPRSDIC CSCHSFEYKG YLCRHAIVVL 540 QMSGLFNIPS KYILQRWTNV ATSRRPIGER LDDVQAKVRR YNDLCRRAII LGEEGSLTQE 600 SYNIAVGALK EALKQCATVN VTSEANLRSG STATLAIQDV DEQRATVNVT SEVNLKSGST 660 ATHAIQDVDV VCQGNTSAAR EPGSCSKAAQ TSKGSKRADP ENEMAVNNNT SNKKGKVPLE 720 PDIANSAQGV FEQMDMPGSL DYHPARFMTT LLRGGDINKR GAELLGQLLQ EQN

Sequence ? help Back to Top

Protein Sequence Length: 773 aa Download sequence

MEPNVGLGNS NVEPRDDMEF DTHEAAYEFY KEYAKSEGFG TAKLSSRRSR ATKEFIDAKF  60
SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKKRSSNGKW YIHSFIKEHN HELLPAQVHF  120
FRSHRNVDPL NNDAKVRRKK MLAPVSKQYV AYQFSGNLEN LFRNQNDRGR SLSLEEGDAQ  180
ILLELFVHMQ EENPRFFYAV DLNEEHQLRN VFWVDAKGID SYSKFGDVVS FDTTYFTNKY  240
KIPLVLFIGA NHHVQPTLLG CALIADETVH TLIWLMRTWC LAMGGRGPRI LLSDQNDNVK  300
AAVGAVLPDT QLYFSLWSIL EKIPRCLDYL SMWHELFMAK FSKCIYKSWT EEQFEHRWWK  360
LIEKFNLRED EWVQSLYEDR KLWVPSFMRD VSFASLSMAS RTESLNSFFD KYIQSETSLR  420
DFIGQHKLIL EDWYEEEAKA NFDAWHEMPE LKTPSPFEKQ MLLIYTHEIF KKFQVEVLGA  480
AACHLKKESE DGTSITYSVK DFDANQDFMV EWDAPRSDIC CSCHSFEYKG YLCRHAIVVL  540
QMSGLFNIPS KYILQRWTNV ATSRRPIGER LDDVQAKVRR YNDLCRRAII LGEEGSLTQE  600
SYNIAVGALK EALKQCATVN VTSEANLRSG STATLAIQDV DEQRATVNVT SEVNLKSGST  660
ATHAIQDVDV VCQGNTSAAR EPGSCSKAAQ TSKGSKRADP ENEMAVNNNT SNKKGKVPLE  720
PDIANSAQGV FEQMDMPGSL DYHPARFMTT LLRGGDINKR GAELLGQLLQ EQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.2	0.0	FAR1 family protein