PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24595.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 338aa    MW: 37931.4 Da    PI: 8.5545
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.7e-08168215455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  PHU24595.1 168 SHSLAERVRRGKINERLRCLQDIVPGC----YKTMGMAGMLDEIINYVQSLQ 215
                 8*************************8....355999999*******99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MADHQFTSDI QNCITNNSPF PLSNFDSSID FMNQFPDMMT IPCSSDMSSF NLHSSLEFSH  60
ENIFNQVAEF PGNLQEIFQG NFQQGDAKIN AMENNLPRND NINESKKRKK IDTPESSSAY  120
SSPAVSAAGT KRRNSKGRGN KVKSNEKEEE KPSDVVHVRA KRGQATDSHS LAERVRRGKI  180
NERLRCLQDI VPGCYKTMGM AGMLDEIINY VQSLQNQVEF LSMKLTAASS YYDFNSESDI  240
LVALQRAKAY EALKMQKMKK EIGCEELSSN QVGPYDHNFG KQNNTLLMKN HESRPTGSAP  300
FPEANVVAVH DQPKIRQNYY RDRGRGYGSG CGRGRGRG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106110KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.12e-59bHLH family protein