PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24812.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 377aa    MW: 41632.9 Da    PI: 4.7021
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-19103152255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++  +++++g
  PHU24812.1 103 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDVEARRIRG 152
                 69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MCGGSIISDY IAPSRTSRRL TAELLWGRAD LSKKLKNLSN YHSKPLRSEV VDDFEADFQD  60
FKEFSYDEDD VVVDVKSFTF SAPKKSTDKD AADRSSKRKR KNQYRGIRQR PWGKWAAEIR  120
DPRKGVRVWL GTFNTAEEAA RAYDVEARRI RGNKAKVNFP DEAPAPASRH SVKLNPQNGL  180
PKESLDSVPS DSTIMNSVGD GYYDSLIFPE EKPMTKQYAY GNGSSASADT GFGSFTPSIG  240
ASAGADIYFN SDVGSNSFEC SDFGWGEPCS RTPEISSVLS AAVESNEAQF VVDANPQKKL  300
KSCTNNPVAD DGNTLNRLSE ELSAYEPQMN FFNLPYMEGN WDASVDAFLN TSATQNGENA  360
MDLWSFDDVP SLMGGVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.31e-73ERF family protein