PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25027.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 241aa    MW: 26567.8 Da    PI: 7.6566
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.52.5e-20135169135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  PHU25027.1 135 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 169
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MNSCGSAYCH GGPCTCGLYY GQNNDTSAYS MFYSQYHQKD ENYLENMYSF ANSSPSSSSS  60
SVDCTLSLGT PSTRLSTNEN EKRVHDTHER RSSSYMSKCW NILQNNNHTT NKSSRGSSNA  120
NTNSSGADPL VARRCANCDT TSTPLWRNGP RGPKSLCNAC GIRYKKEERR ASAAAVATAN  180
GGGMDSSQHM INGSWVHHSQ AQKMPCYSSA YGNHEFRFTE DDDRDSDSAI SFWPFLASQH  240
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.13e-36GATA family protein