PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25150.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HB-other
Protein Properties Length: 72aa    MW: 8105.32 Da    PI: 8.4765
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25150.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.33e-092572346
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkv 46
                k  ++t+eq+e+Le++++++++ps  +r++L  ++    +++ +++kv
  PHU25150.1 25 KYVSYTAEQVEALERVYAECPKPSSLRRQQLICECpilsNIEPKKIKV 72
                56799**************************99999999999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MAMVAQQYRE SSSGSITKHL DSSGKYVSYT AEQVEALERV YAECPKPSSL RRQQLICECP  60
ILSNIEPKKI KV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.12e-33HD-ZIP family protein