PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25172.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 219aa    MW: 24264.8 Da    PI: 10.0801
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.4e-31148205359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ ++p+++++tYe+eHnh+
  PHU25172.1 148 DDYSWRKYGQKPIKGSPHPRAYYKCSSVrGCPARKHVERALDEPTMLVVTYESEHNHS 205
                 99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MAVELMMNYM NTARNTSSNF MTNMDDKAVV QEAASGLENV EKLIKLLSQK QGNLTSFLNR  60
EKSPPMEIEI AADAAITKFK KVSSAVKPPL SSSSSFNIRK CTSSENGFSG KCSGSSGRCH  120
CSKRRKLRPK RVVRVPAISM KLSDIPPDDY SWRKYGQKPI KGSPHPRAYY KCSSVRGCPA  180
RKHVERALDE PTMLVVTYES EHNHSLSVAE TSSLILESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.12e-53WRKY family protein