PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25269.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 215aa MW: 23206 Da PI: 8.8591

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48	2.1e-15	18	78	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++++eq+ +Le+ F++ +p ++e ++ k l + ++++++WFqNrR + ++ PHU25269.1 18 RSRWNPKPEQILILESIFNNgMVNPPKDETVRIRKILeqfgTVGDANIFYWFQNRRSRSRR 78 89***************99***********************************997 PP
2	Wus_type_Homeobox	104.7	6.2e-34	17	80	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW+P+peQi iLe+++++G+++P+k+e+ ri++ Le++G ++d+N+fyWFQNr++R+r++q PHU25269.1 17 VRSRWNPKPEQILILESIFNNGMVNPPKDETVRIRKILEQFGTVGDANIFYWFQNRRSRSRRRQ 80 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MEDSTSSNQS CERNEPVRSR WNPKPEQILI LESIFNNGMV NPPKDETVRI RKILEQFGTV 60 GDANIFYWFQ NRRSRSRRRQ RQIQASLSAV EIGGEQSATA TSSRGGAIQF HTSTANVGPL 120 SISFPMAAPA PSSYLLLGSS SSSSSPGGAV GNANDGLFPF SGQMGLPQVE QNSSISSILC 180 SSPTDNANLH YQTGINIALA QVPKIICANI VLNYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	3e-33	WOX family protein