PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25282.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 614aa MW: 69949 Da PI: 9.9227

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25282.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.9	3.2e-12	24	109	2	96
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 fk+ + ++++k l +p +f+ ++g + + le ++g Wevkl +++ g+ +l++GW++F + + g f++F+++g+s f v + PHU25282.1 24 FKIILFPHSSK---LHIPDEFVMKYGAD--LRDLVFLEVPTGAIWEVKL--QNSNGMKWLKEGWNKFKEYYSIGCGYFLLFQYKGNSHF--SVFI 109 55555555555...56*******977..555899999******..********************************9999..5555 PP
2	B3	54.7	1.9e-17	513	609	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 f+ + p++v+++ +l +p +f++++ + e++ + l+ ++gr W+ kl ++s+ + ++GW++Fv n Lke D++vF+l +++e l v++fr+ PHU25282.1 513 FIVSMQPAYVSQNFQLDIPVNFFKKYIRE--EETIINLRVSNGRIWRAKLFNIQSSCVKIQASGWRDFVLGNSLKEHDTCVFELFEDTEPVLDVTIFRA 609 778899******************544..4568***********778888888889*******************9988777788999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MKKNKNRKTN MVKRRVKKMS RQFFKIILFP HSSKLHIPDE FVMKYGADLR DLVFLEVPTG 60 AIWEVKLQNS NGMKWLKEGW NKFKEYYSIG CGYFLLFQYK GNSHFSVFIF DLSASEIEYP 120 SGPNEDITPE KFVNLVGDAS HRKKTQKNAC DDDFLRNKTA KVADRSYSER EKSHSKQKTI 180 TSLDASICRY PLRSKQVKDV KTENGGVEEH CSKIPVVDPS VIKKTTTNQH SKQKTTTSLD 240 ASICRYPLRS KQVKDVKTEI GDVEEHCSKI PVVDPLVIKK TTTNQHHEKK TSVSLDTSHC 300 RYPLRSQQLK EVKLGKPNAE EDLLSVAQKA KMKKANNVKL EKGDVEECNK EMPVGDPSTT 360 KKKTTNRHHQ KKTSFSLDTS HCRYPLRSKQ LDEVKLGQWE AGGNIHNKLP KKTVAADSSY 420 CKTQNSGLPA PSRSCKPIRV KLEKPDNLFC AAEKAEGKET INVKLETGDM EGNLNSASYK 480 GADSTASEMT RLGKKKMLPS EKHNWGNYCN PHFIVSMQPA YVSQNFQLDI PVNFFKKYIR 540 EEETIINLRV SNGRIWRAKL FNIQSSCVKI QASGWRDFVL GNSLKEHDTC VFELFEDTEP 600 VLDVTIFRAM TPAS

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MKKNKNRKTN MVKRRVKKMS RQFFKIILFP HSSKLHIPDE FVMKYGADLR DLVFLEVPTG  60
AIWEVKLQNS NGMKWLKEGW NKFKEYYSIG CGYFLLFQYK GNSHFSVFIF DLSASEIEYP  120
SGPNEDITPE KFVNLVGDAS HRKKTQKNAC DDDFLRNKTA KVADRSYSER EKSHSKQKTI  180
TSLDASICRY PLRSKQVKDV KTENGGVEEH CSKIPVVDPS VIKKTTTNQH SKQKTTTSLD  240
ASICRYPLRS KQVKDVKTEI GDVEEHCSKI PVVDPLVIKK TTTNQHHEKK TSVSLDTSHC  300
RYPLRSQQLK EVKLGKPNAE EDLLSVAQKA KMKKANNVKL EKGDVEECNK EMPVGDPSTT  360
KKKTTNRHHQ KKTSFSLDTS HCRYPLRSKQ LDEVKLGQWE AGGNIHNKLP KKTVAADSSY  420
CKTQNSGLPA PSRSCKPIRV KLEKPDNLFC AAEKAEGKET INVKLETGDM EGNLNSASYK  480
GADSTASEMT RLGKKKMLPS EKHNWGNYCN PHFIVSMQPA YVSQNFQLDI PVNFFKKYIR  540
EEETIINLRV SNGRIWRAKL FNIQSSCVKI QASGWRDFVL GNSLKEHDTC VFELFEDTEP  600
VLDVTIFRAM TPAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-23	B3 family protein