PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25348.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 172aa    MW: 19560.1 Da    PI: 4.8003
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.90.0001112133930
                 HHHHHHHHHHHHHHHHCTSCCC CS
         HLH   9 ErrRRdriNsafeeLrellPka 30 
                  r+RR+ + s++++L ++lP+ 
  PHU25348.1 112 SRKRRSGMLSKIQKLAKILPTY 133
                 59******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MAPKRKETEL SPSKGTSEVA RLHSPLYELA LQASSQLKAE DNEHGEEECF KRDDPNTNSP  60
SIEELVKTSS TDCYSVRMQC DGTTNLTGDE FHWMLVVVVL KERCIQVYDS ISRKRRSGML  120
SKIQKLAKIL PTYPDMSGFL DQKVRTDWSM IEAYGDEMVN PFDIQYVEGI AQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112117SRKRRS