PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25364.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 192aa    MW: 20866.5 Da    PI: 8.8681
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.85.5e-392685261
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                ++++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lr++P+Ggg+rkn k+
  PHU25364.1 26 PDQQLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDIPIGGGSRKNAKR 85
                7899****************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MTLEASEKRV TKQQTAGSVL PPAQEPDQQL PCPRCDSTNT KFCYYNNYNL SQPRHFCKSC  60
RRYWTHGGTL RDIPIGGGSR KNAKRCRIYT STPFSSSTAV SPHGNSPFLV PLPTANQLLF  120
GSDVKPCLNM SGNNFTSLLS SHGPTGVLAL GGIEDVSFSI GRAAVWPFPG VPDSYIHNYD  180
SGVGASMWQF SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.14e-42Dof family protein