PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25371.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 172aa    MW: 18972.2 Da    PI: 8.8346
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25371.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.71.7e-12741501797
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ++  +fa+++ ++k++s +++l+    +sW   +  + ++ r  +++GW+ Fv  n+Lk gD +vFk+++ ++  + v++f
  PHU25371.1  74 IIKLTFARKY-IPKNCS-KIMLRVAGKESWAAIY--SVGPARARISTGWSTFVVGNHLKLGDGCVFKVIKGTQVVMDVTIF 150
                 6778999999.455676.9***************..99999999***********************99877777777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MAVHSFENLS PNCPLGQSSK IKRREGDAEN DVSLDMHIKR MEIEKLLEEG VSSPSCTREG  60
QSEFFICTVI SLRIIKLTFA RKYIPKNCSK IMLRVAGKES WAAIYSVGPA RARISTGWST  120
FVVGNHLKLG DGCVFKVIKG TQVVMDVTIF HAAESMPMPM GQAIISSCYG LI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.17e-09B3 family protein