PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25376.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 251aa    MW: 29027.4 Da    PI: 5.5657
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.85.3e-15431231198
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                   + +l +pk+fa+++ ++  ++  + le +sg++Wev++  + + g+++l+kGW++F++   +  g f++F+++ rs    +v +f+
  PHU25376.1  43 ECT-CLKIPKDFASRYCKNMLNP--VYLEVPSGEVWEVEV--EHSEGQMWLSKGWQDFCDYYSISCGHFLMFEYNARSHY--NVIIFD 123
                 344.49**********5454444..***************..99999**************************9876555..676665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MATKFRRQNG EGFSLGNPSS STTNNNNINV QPKFYKIILS QHECTCLKIP KDFASRYCKN  60
MLNPVYLEVP SGEVWEVEVE HSEGQMWLSK GWQDFCDYYS ISCGHFLMFE YNARSHYNVI  120
IFDLSAAEIE YPYSSAYGIR TIHCQGTHHA PSTDRPESDD SVDILEGIPR SQKLKQKNRD  180
LVERSLDNKG HCPLGQSSKR KRHDGDTEDD ISIDMHIKRM EVEKSQEDID FPSFTREGQS  240
EDLICYLSYW L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-20B3 family protein