PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25384.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SBP

Protein Properties

Length: 200aa MW: 22430 Da PI: 9.7874

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	37.6	5.8e-12	142	172	47	77
SSEEETTT--SS--S-STTTT-------S-- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkq 77 rf+ l efD++k+sCr+ La+hn+r+rk++ PHU25384.1 142 LRFYLLAEFDDGKQSCRKCLAGHNKRQRKPH 172 59***************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MGRSLFMCLW VVSQGHKPSM GRSQLICTGG SLMVTVQYSN DYKDDKNEVK VQVFEQVLSG 60 LLGFGCQSGP MEFWGVTGSI SKNSSLIDLK PGRFPDHVSA NIFKYPKSMP SFTTVESIFP 120 AKRMQQVLLV STKAEFSLDI LLRFYLLAEF DDGKQSCRKC LAGHNKRQRK PHTGMHSGYK 180 LFLSFAINVV LNFAYFSSTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	8e-10	SBP family protein