PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25416.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 99aa    MW: 10833.1 Da    PI: 9.9748
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-192373256
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d      ++ r++lg+f+t eeAa+a+++a+ +l+g+
  PHU25416.1 23 RFAGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTSEEAARAYDEAACSLRGA 73
                688******.7*********33....35*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MKTHDDNGNV ADAAAGAQQP RKRFAGVRQR PSGRWVAEIK DTIQKIRVWL GTFDTSEEAA  60
RAYDEAACSL RGASTRTNFW PCSSSSTSAL PPKILMFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-31ERF family protein