PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25506.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 92aa    MW: 10351.7 Da    PI: 8.5174
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.49.5e-0723591854
                HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +  ++L++llP+ + + ++ K s + +L+++++YI++L
  PHU25506.1 23 ELVSKLQQLLPEiR-NRRANKASASKVLQETCNYIRNL 59
                56689*******66.77888888889**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MSGRRSRQSE GGTSRISDDQ IIELVSKLQQ LLPEIRNRRA NKASASKVLQ ETCNYIRNLH  60
KEVDDLSDRL SQLLSTIDAD SPEAAIIRSL IM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.19e-35bHLH family protein