PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25853.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 323aa    MW: 36801.9 Da    PI: 7.0856
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.66e-50361642128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk.kg 97 
                  pGfrFhPtdeelv +yL++kve+k++ l ++ik++diyk++PwdLp  + ++++kewyf++kr +ky+++ r+nr ++ sg+Wkatg dk+++s+ +g
  PHU25853.1  36 LPGFRFHPTDEELVGFYLRRKVEKKPIGL-DIIKQIDIYKYDPWDLPkGSNNNGDKEWYFYCKRGRKYKNSIRPNRvTAGSGFWKATGIDKPIYSSnDG 133
                 69*************************99.99***************446667899********************5556**************99778 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 + +glkk+Lv+ykg+a kg+ktdW mhe+rl
  PHU25853.1 134 KCIGLKKSLVYYKGSAGKGTKTDWQMHEFRL 164
                 88***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MMEVEKKSSS SSIVTNNYCN KGIDDDDDDD DDDVVLPGFR FHPTDEELVG FYLRRKVEKK  60
PIGLDIIKQI DIYKYDPWDL PKGSNNNGDK EWYFYCKRGR KYKNSIRPNR VTAGSGFWKA  120
TGIDKPIYSS NDGKCIGLKK SLVYYKGSAG KGTKTDWQMH EFRLPSQNDA HTSTKHLHAD  180
TIPQEAETWT LCRILKRNAS YRKPIQDWKE VARKQQNDPV VNTDALSSKI CSNNNKDSPS  240
NNNSQIYISF STTPVVKQRP LIDYGYIKPN NQEFVGQQSN ESALSTAAAS SNSTSPVDFN  300
EWLEHGNWNE LTSIIELNCD PLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-69NAC family protein