PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26160.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 310aa    MW: 35724.5 Da    PI: 8.78
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.12.3e-1344134186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++q + +L++a  ++  +l+rg+l++++W+ vs+ +     + ++  r+ +qCk++++ l+k+yk +k+  ++ + + +s++p+f++l+
  PHU26160.1  44 CWSEQATWTLVDAWGRRYMELNRGNLRQKDWQFVSDSVnalhgHTKKSWRTDIQCKNRIDTLKKKYKVEKAKIIESNGTLKSSWPFFERLD 134
                 7*************************************999988889999*******************99999887777789*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MAIHRRWTDS GKRRGKRQRQ GGERDGGGVA VTAPSRPLPF REDCWSEQAT WTLVDAWGRR  60
YMELNRGNLR QKDWQFVSDS VNALHGHTKK SWRTDIQCKN RIDTLKKKYK VEKAKIIESN  120
GTLKSSWPFF ERLDLLIGNS DKKVTPVMAS PLPLPLSSPP MGVPLPYRRS PVVTPVVPLP  180
QKRQLPAFDD SSFRRNYSAV AAAAAAAGGE EDCDEEEEEE EEDMEEMDEE SREDDGIRRL  240
AKAIERFGEI YERVEGMKQR QMVELEKQRM QFAKDLEVQR MQLFMDTQVQ LERIKHTKRS  300
GSDGIKLTPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.14e-31Trihelix family protein