PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26205.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 229aa MW: 25513.6 Da PI: 8.7835

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26205.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.9	4.5e-12	23	57	18	55
AP2 18 eIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 eI+dp++ ++r++lg+f+t+eeAa+a++aa+++++g PHU26205.1 23 EIKDPYT---KTRVWLGTFDTPEEAARAYDAAAREFRG 57 7899765...5************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MEQNKKSDAP VAVAAPAIET RREIKDPYTK TRVWLGTFDT PEEAARAYDA AAREFRGTKA 60 KTNFPRTLTP LNLSNHGGGS SVSTAASFTD LKRNNQSRRF PITGVSAPTA ARDYRYWEDL 120 TAAEVSNCEP SSQKGTVAFL GGGDSVSGYP TQSESESLSM FSYSFNHVEK STIATNVSIW 180 TLTFHRRRTC EWPSISHYEF CIHLRFLNVC KTSLYFMFLK SINTLGCTC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28360.1	4e-10	ERF family protein