PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26206.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 208aa    MW: 22686.3 Da    PI: 8.2141
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26206.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.7e-192675255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GV+ ++ +gr++A+I dp   +++ r++lg+f+t+eeAa+a++aa+++++g
  PHU26206.1 26 HYRGVSKRP-WGRYAAHIVDP---NRKIRVWLGTFDTPEEAARAYDAAAREFRG 75
                6********.*******9998...335************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MEQNKKIDTP VIVAAPVTET RNKEVHYRGV SKRPWGRYAA HIVDPNRKIR VWLGTFDTPE  60
EAARAYDAAA REFRGTKAKT NFPPTLTPLN LSNHGGGSSV STAASFTDLK QTNQSRRLPI  120
TGVSAPTAVR DYRYLEDLTA AEVSNCEPSS QNGTVAFLGG GDSVSGCPTQ SESESESMFS  180
YSFNRVEKPT IATKGLHLDL NLPPPENM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.14e-22ERF family protein