PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26211.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 166aa    MW: 18417.8 Da    PI: 5.5951
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26211.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.66.2e-132373256
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y GVr      r++AeIrd ++    +k+++lg+f+t e+Aa a +aa + ++g+
  PHU26211.1 23 HYNGVRKIQ-GRRYAAEIRDpWK----KKNVWLGTFDTREQAATADDAAVRLFHGH 73
                5889*8665.677*******883....5**********999999999988877775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MEQMKNGDAT VMATTMILHI EVHYNGVRKI QGRRYAAEIR DPWKKKNVWL GTFDTREQAA  60
TADDAAVRLF HGHKAVTNFL PVIDDNIQSV KDFLEKFHER SAIRPSSQAG NNAVRVSLPN  120
ENPVCCLETV DLIGSWSGVQ DDQLPATIGE ETINLDLISL APSGSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-22ERF family protein