PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26212.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 446aa    MW: 48415.1 Da    PI: 10.7081
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.11.7e-111971255
         AP2  2 gykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykG+r + ++gr  + +eI  p e   ++ ++lg+++t++eAa+a+++ +k+l+g
  PHU26212.1 19 RYKGIRKRVRNGRirYGSEITKPGE---TRGIWLGTYDTEKEAAQAYDRVAKRLKG 71
                69***********9999**999844...4**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MAEIENGNVA AAVPPNRVRY KGIRKRVRNG RIRYGSEITK PGETRGIWLG TYDTEKEAAQ  60
AYDRVAKRLK GPGAVLNFPN DDSSEKAEDE LNARSDVSDG GVKNNSNDIL QKNNRDNASP  120
SKAGDIAFTA EAGNISSASK AGRSALRNWK PIQNPHFQAG RSALRIREPS QNPQAAHSKA  180
SCSTLRIRET INQNPQAPRP KAGGGVLRIR EPINQNRQAP RPKAGGGVLR IREPINQNLQ  240
APRPKAGGGV LRIREPINQN PQAPRPKAGG GVLRIREPIN QNPQAPRSKA GGGALRIWEP  300
INQNPLAQAP GGALRIIQEK NQNPQAPHFP ADIASSSKAG SNVLRNPEPN QNRQVADPFP  360
AVNVGDAPSQ LTDREKYYVE IMKTAGALFP NPADYRKAIV DCLRDFDNHV NANNVDNRES  420
VLQDQPPSTT AEDVDTELRL APLGSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.15e-13ERF family protein