PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26221.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

SBP

Protein Properties

Length: 136aa MW: 15697.4 Da PI: 8.3948

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	137.4	4.4e-43	52	127	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqve+C+ad+++ak yhrrhkvCe+hsk++ vl+sgl+qrfCqqCsrfh l efDe+krsCrrrLa+hnerrrk + PHU26221.1 52 CQVEQCTADMANAKPYHRRHKVCEFHSKSSIVLISGLQQRFCQQCSRFHLLAEFDEAKRSCRRRLAGHNERRRKIS 127 *************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence
MDTNKWEGKR TINEAEEEED EHESVEEDNK RKRVLGPSGR KLSGGGSSHP SCQVEQCTAD 60 MANAKPYHRR HKVCEFHSKS SIVLISGLQQ RFCQQCSRFH LLAEFDEAKR SCRRRLAGHN 120 ERRRKISYDS HGESLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	2e-42	SBP family protein