PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26268.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 180aa    MW: 20321.8 Da    PI: 8.6808
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26268.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-1958110156
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 
                 ++y+GVr+++ +g+++AeIrd      ++ +r++lg+f taeeAa a+++a+ +++g+
  PHU26268.1  58 KKYRGVRRRP-WGKYAAEIRD----SaRHgARVWLGTFETAEEAALAYDRAAFRMRGA 110
                 59********.**********....33236**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MVPTHQSDLP LNENDSQEMV LYEVLNEANN LHIPYLPQRN QLIPRNNHIL RPSQTIGKKY  60
RGVRRRPWGK YAAEIRDSAR HGARVWLGTF ETAEEAALAY DRAAFRMRGA KALLNFPSEI  120
VTSSVSVDKL SLCSNSYTTN SSNSNSNEVS SGENAFKSRI SNQFSQDVKT ELCMENFLAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-32ERF family protein