PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26269.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 249aa    MW: 28771.2 Da    PI: 4.8183
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-19101151255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  PHU26269.1 101 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFSTAEEAAMAYDKAALRIRG 151
                 7********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MTHIVEKVVA CEEILENVWA NFISKNDQNS QSVTNDQCYE KYWEQFPVLE RLPSLGADTW  60
EEILDGIMAP RDDKKNSTGE STSKNEDVEK KKKMVNNNTR HYRGVRRRPW GKYAAEIRDS  120
SRKGARVWLG TFSTAEEAAM AYDKAALRIR GPKANLNFPL ETVAQAIVTS NNCLHEKELN  180
FSLSSGDQYN SRKRVSRDWN MYENLEEINL LPVEKRIMRS MEEDLFNDLD ILEFEDLGSD  240
YLDSLLSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-31ERF family protein