PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26283.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 363aa MW: 40967 Da PI: 6.3005

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108.9	7.4e-34	86	190	1	103
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....kaaksaa 95 a+g+kdrhsk++T++g++dRRvRls ++a++f+d+qd+LG+d++sk+i+WL+++ak+ai++l + +s+s+c++ +s+ + s+++++ ++ ++++ PHU26283.1 86 ATGRKDRHSKVSTAKGPKDRRVRLSPNTAIQFYDVQDRLGYDRPSKAIDWLINEAKAAIDALGEF--PSNSHCTKLNSKMQCSFDQQQnprfSSVSNTE 182 589***********************************************************999..66666955555555554444433543333333 PP TCP 96 kskksqks 103 ++ +++++ PHU26283.1 183 CGVQDNQQ 190 33333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MNHQLQVSDE EEEEEEAFQE NGIENLQSHY QNQHIQQLPQ PLCPKPAKWA NFTACEQELN 60 KVTEQMKPKR AKMDVIEVHG GRIIRATGRK DRHSKVSTAK GPKDRRVRLS PNTAIQFYDV 120 QDRLGYDRPS KAIDWLINEA KAAIDALGEF PSNSHCTKLN SKMQCSFDQQ QNPRFSSVSN 180 TECGVQDNQQ EVNYDIPIQN VNLFPSSDGS KNPFFSEFHS YPNVHFLNFQ SLQDNTILSS 240 SNHHQGSFST TTSIPLNSNM EMARFRRSLN ENIASSNSRN GEVGEDSSLN HLAHHFPSVL 300 SQNQVFSHRE PLQSSIFPLT RDPLSTQHHT LSYGFANDGF SGVTSSAPRI QGEEEQGTMF 360 SAS

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MNHQLQVSDE EEEEEEAFQE NGIENLQSHY QNQHIQQLPQ PLCPKPAKWA NFTACEQELN  60
KVTEQMKPKR AKMDVIEVHG GRIIRATGRK DRHSKVSTAK GPKDRRVRLS PNTAIQFYDV  120
QDRLGYDRPS KAIDWLINEA KAAIDALGEF PSNSHCTKLN SKMQCSFDQQ QNPRFSSVSN  180
TECGVQDNQQ EVNYDIPIQN VNLFPSSDGS KNPFFSEFHS YPNVHFLNFQ SLQDNTILSS  240
SNHHQGSFST TTSIPLNSNM EMARFRRSLN ENIASSNSRN GEVGEDSSLN HLAHHFPSVL  300
SQNQVFSHRE PLQSSIFPLT RDPLSTQHHT LSYGFANDGF SGVTSSAPRI QGEEEQGTMF  360
SAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	3e-37	TCP family protein