PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26455.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 194aa MW: 22592 Da PI: 9.4204

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.5	1.1e-33	24	119	2	102
HHHHHHHHHC....TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeile....deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++le ++++++++sw+ +g+ fvv+ + ef++ +LpkyFkh+nf+SF+RQLn+YgFkk+ +++ weF+h++F+kg ++ll PHU26455.1 24 FLSKTYDLLEeqeeESSINKVVSWNGEGSGFVVWCPAEFSEVMLPKYFKHNNFSSFIRQLNTYGFKKIASKR---------WEFQHEKFQKGCRHLL 111 9*******555555999**********************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i rkk PHU26455.1 112 SEITRKKY 119 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MATDAIPASR KMGRSSRMKC PAPFLSKTYD LLEEQEEESS INKVVSWNGE GSGFVVWCPA 60 EFSEVMLPKY FKHNNFSSFI RQLNTYGFKK IASKRWEFQH EKFQKGCRHL LSEITRKKYE 120 PSAFPTYLNP SAKNIILGST KEEINTSRQL LMEENQNLKR EKMELQMQIA HFKALEVKLL 180 QCLTQCMESP HNKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	2e-41	HSF family protein