PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26555.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 202aa MW: 23042.4 Da PI: 5.2468

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.1	0.00018	42	79	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +Er+RR+++ +++ eLr+l+ k +i + A+ YI++Lq PHU26555.1 42 NAERKRRQKLSERLLELRSLMTKE-----------TIITDAITYIRELQ 79 58*******************998...........89999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MEFPKSPFDD SHMSEEREVR GRTDKRKTID GEVKEYKSKN LNAERKRRQK LSERLLELRS 60 LMTKETIITD AITYIRELQT NVDDLSEQLL EMEATHAEQL ETKNEVIIDT AEDMGKWGIE 120 PEVQVAHIGP TKLWIKIVCQ KKRGGFTKLM ETMNVLGFDL NDTSVTASKG ALLVTASVEV 180 VRGGLNEANQ IREILLEIIR GI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	44	49	ERKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21330.1	2e-30	bHLH family protein