PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26737.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 627aa    MW: 71752.5 Da    PI: 6.1822
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26737.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.81.7e-5661331128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 lppGfrFhPtdeelv +yLk+k+++kk+el e+i+evd+yk+ePw+Lp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s ++
  PHU26737.1   6 LPPGFRFHPTDEELVAYYLKRKINNKKIEL-EIIPEVDLYKCEPWELPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QT 102
                 79****************************.99***************6434555777**************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 ++vg+kktLv+y+grap+g +tdWvmheyrl
  PHU26737.1 103 RAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133
                 99***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    
MAPVSLPPGF RFHPTDEELV AYYLKRKINN KKIELEIIPE VDLYKCEPWE LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECEV ANGLQDAYAL CRVIKRSLNN NGPKIGEQYY GSAAISDRSS  180
SIDQVYSEGR GDLHDIESSH DHEYGIMPSS SSSSMAVHGS PINTNASAPT DDRWMQYLSN  240
EAFTFNNTNT AQPIPNYGTL PFPPSKVDIA LECARLQHRF TLPPLEIQDF PQVGYVDHDA  300
KMPQSSFINQ DSWGGNSNLC APIDDFSFLI PPNNNQIHHD LSSFNFMEQD DNVIRSIDIG  360
DFDHEDFQSD RMVENLRWIG MSNRDLEKKI FEDYKTVPID NVSSVQRDHE FQGENSGQNN  420
SFNSGLNETE ANNFSMGFGN DNLLGDGDVT DGFSSCPSFQ VYGKIEVNHG FFIATRQASK  480
TFYHQVTPSR TLTIHRNLVP LHDFPKNRAP HDNFVTKVTR PWTTTMRTLV GMVAILQTLW  540
LYVGGCLELE EKGFKLEDKK GVYEECCLIE RVEKKKVEDF KWDIYKQSKF PIGDKDCCYL  600
EKKWPNYLTL VVALSSIWLH HIIVPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-124NAC family protein