PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26747.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 124aa    MW: 14352.2 Da    PI: 9.8608
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.7e-097399128
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIa 28
                     r rWT+eE++++++a k++G   W++I 
       PHU26747.1 73 RERWTEEEHKKFLEALKLYGRA-WRRIE 99
                     78******************88.**996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MFNSEMSLMV NNAIAPRDQS GESGVDSIHS SRNQISSDVG ASSTRSIKLK EQVASADEYA  60
PKVRKPYIIT KQRERWTEEE HKKFLEALKL YGRAWRRIEG RNEKRLMFIR DISWLSLHIN  120
GDLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.19e-25MYB_related family protein