PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26818.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 350aa MW: 39710.3 Da PI: 9.0358

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.7	6.6e-16	15	95	9	99
HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++ l++p f+ ++ +g +++ ++ + g+sW vk+ ++++ +++GW Fv++++L+ gD ++F+++g++ef v++f++ PHU26818.1 15 QKGFKHGLTIPTGFL-KYlKGR--DQIEHVVLRSGGKSWLVKV--KGCR----FKAGWAAFVEEHDLQLGDLLIFRHEGDMEF--EVSIFDS 95 4445556******.664555..5678888899*****..6666....9*********************999999..9999986 PP
2	B3	56.8	4.1e-18	240	322	3	88
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 + +p++ + s+ lv+p k a ++g+++++ l+++de+ rsW+vkl +++++++t+GW eF +an LkegD ++F+++++ PHU26818.1 240 YIVKPPYCFVSDSLVIPTKVALANGLSNKR-CGLIIRDERERSWNVKL--HSSGNSVYITGGWHEFRDANCLKEGDCIMFEVVSNG 322 5678999999************666433.36999********..999999***********************87753 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MKIPPKKPHF FKPIQKGFKH GLTIPTGFLK YLKGRDQIEH VVLRSGGKSW LVKVKGCRFK 60 AGWAAFVEEH DLQLGDLLIF RHEGDMEFEV SIFDSSHCDR EYGEYLQEEE GCDIVEETSK 120 NFKFKGKSKL CIMSSSKEGD YMMFEVVANG EKPIWKFHRK EKKGQSVGGP SFALSNSACA 180 PSVPARNQAY SWKFEVKDKG SLESDRDADK PNPNIVSRRK AFPNEESATH SSFGKSHFVY 240 IVKPPYCFVS DSLVIPTKVA LANGLSNKRC GLIIRDERER SWNVKLHSSG NSVYITGGWH 300 EFRDANCLKE GDCIMFEVVS NGNTPIWKYN GKFFGNLRMP NITEATDRII

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MKIPPKKPHF FKPIQKGFKH GLTIPTGFLK YLKGRDQIEH VVLRSGGKSW LVKVKGCRFK  60
AGWAAFVEEH DLQLGDLLIF RHEGDMEFEV SIFDSSHCDR EYGEYLQEEE GCDIVEETSK  120
NFKFKGKSKL CIMSSSKEGD YMMFEVVANG EKPIWKFHRK EKKGQSVGGP SFALSNSACA  180
PSVPARNQAY SWKFEVKDKG SLESDRDADK PNPNIVSRRK AFPNEESATH SSFGKSHFVY  240
IVKPPYCFVS DSLVIPTKVA LANGLSNKRC GLIIRDERER SWNVKLHSSG NSVYITGGWH  300
EFRDANCLKE GDCIMFEVVS NGNTPIWKYN GKFFGNLRMP NITEATDRII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00260.1	8e-27	B3 family protein