PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26819.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 174aa    MW: 20252.3 Da    PI: 6.7735
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.62e-1770149587
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 +++ +++++++l+lpk fa+++g+    + +++l de+ r W+v l  +  ++r+ +++GW +F kang+++gD+ +F+l+++
  PHU26819.1  70 TIKRYTFTKAILCLPKGFAKSNGLMD--KHEMILVDEKQRLWTVWL-GKMDPRRFGIKSGWPQFRKANGVQVGDTYMFELTDN 149
                 568899****************7773..348***************.6888889*************************9874 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MEFKVSSHCD REYAEYLQEE EESNTVEETS KKVEFKVIKD LRHKVPDMTT PISQIPASTS  60
ADANPHFIST IKRYTFTKAI LCLPKGFAKS NGLMDKHEMI LVDEKQRLWT VWLGKMDPRR  120
FGIKSGWPQF RKANGVQVGD TYMFELTDNG TIPIMHVHCE CFFIFLWCND YLVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-13B3 family protein