PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26831.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WOX
Protein Properties Length: 275aa    MW: 30700.2 Da    PI: 5.8648
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox696e-2295155257
                 T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                 r+R+t+t+ ql++Le+ Fe+ n +ps+++++e++++l    +++e++V++WFqNrRa+ k+
  PHU26831.1  95 RQRWTPTPMQLQILERIFEQgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 155
                 89*****************99**************************************97 PP
2Wus_type_Homeobox101.75e-3395157365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        r+RWtPtp Q++iLe+++++G  tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq
         PHU26831.1  95 RQRWTPTPMQLQILERIFEQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 157
                        89***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEWDKQQQQP PAQPQTAEEL NGGGGSSGGG MFVKVMTDEQ MEVLRKQIAV YATICEQLVD  60
LHKSMATQHD LAGVRLGNLY CDPLVTSAGH KITGRQRWTP TPMQLQILER IFEQGNGTPS  120
KQKIKEITSE LSQHGQISET NVYNWFQNRR ARSKRKQQVA ATNNNESEVE TEVESPNEKK  180
TKPEDLQSSH MPTSVAEDLG YQNPEVSSGM HTLDPRTSKP EPMFPSDGSS KSAGSYGQMS  240
FYGMSNPRMD QIMGKMEVPG SYHPYLHAED YNMTG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149157RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.16e-80WOX family protein