PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27013.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 218aa MW: 25502.9 Da PI: 6.1567

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	50.7	5.9e-16	7	138	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekew..yfFskrdkkyatgkrknratksgyWkatgkdkevls 94 G+rFhPtd+e + +L + v++++++ + + +++d+y k ePw++ + +++ +++++ yf +k+++++ +g+ n g Wk++ + ++++ PHU27013.1 7 GYRFHPTDSEGL-TFLLRFVAKQEMHDSGFiTTNIDVYgKQEPWEIYsHgvpCAD-DDDSCyrYFITKKSNTTYHGEVGNT---LGSWKQQDEGQPIHY 100 9********99.788888888887777773556699456***733554333.4445523566666555555555444...499*******9 PP NAM 95 kkgel......vglkktLvfykgrapkgektdWvmheyrl 128 +kg+ +g+k+ + + +++++ W+m+e++l PHU27013.1 101 NKGNSssstpvIGCKRRMRYMIKDHKD--DGLWLMKEFEL 138 84444566777*****9554444..89*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MEKKGLGYRF HPTDSEGLTF LLRFVAKQEM HDSGFITTNI DVYGKQEPWE IYSHGVPCAD 60 DDDSCYRYFI TKKSNTTYHG EVGNTLGSWK QQDEGQPIHY NKGNSSSSTP VIGCKRRMRY 120 MIKDHKDDGL WLMKEFELSN VILKRFDEDR RDYVLCAIKK KPIDTCPFEM NYDSDETDEV 180 TCSNDNDNTM CRNLLMMFLF WKISRVLLSC AFLLYSLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	2e-07	NAC family protein