PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27045.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 78aa    MW: 8964.05 Da    PI: 8.8966
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27045.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.45.7e-12851344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+ E +++ +a + + ++   +W  Iar++g g++ +++k+++
       PHU27045.1  8 AWTPRENKKFEQALAVYDKDtpdRWQNIARYVG-GKSVEEVKHHY 51
                     7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MASNSLSAWT PRENKKFEQA LAVYDKDTPD RWQNIARYVG GKSVEEVKHH YAILVEDLKH  60
IESGDVPFPK YKSDGKSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.26e-34MYB_related family protein