PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27120.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 156aa    MW: 17650.3 Da    PI: 9.4625
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind132.97e-411485193264
   GAGA_bind 193 sidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqga 264
                 + +l+ln++++Des++PvPvCsCtG+++  YkWG GGWqSaCCtttiS+yPLP+ +++r +R++ rKm +ga
  PHU27120.1  14 KDNLGLNQINFDESAMPVPVCSCTGTTQPRYKWGHGGWQSACCTTTISMYPLPQISNKRYSRVGRRKMGSGA 85 
                 5689****************************************************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MDNKEGDTQL TSLKDNLGLN QINFDESAMP VPVCSCTGTT QPRYKWGHGG WQSACCTTTI  60
SMYPLPQISN KRYSRVGRRK MGSGAQGYDL SIPRHKPLQH IKIASVCPFN WDLTIWRRHL  120
LRLCQSSNSP YQNGLIYTVL LLSLKYVVMN IDLGDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.16e-33BBR-BPC family protein